Full speed ahead for single-cell analysis
技能树官宣
牛人清单
- Regev, Aviv (330)
- Clevers, Hans (232)
- Luo, Liqun (232)
- Jaenisch, Rudolf (194)
- Gratton, Enrico (174)
- van Oudenaarden, Alexander (160)
- Weissman, Irving L. (151)
- Zhang, Yi (148)
- Amit, Ido (145)
- Hyman, Anthony A. (142)
- Tang, Fuchou (141)
- Klenerman, David (136)
- Meissner, Alexander (125)
- Li, Wei (122)
- Fuchs, Elaine (116)
- Buzsáki, György (114)
- Deisseroth, Karl (113)
- Baltimore, David (108)
- Itzkovitz, Shalev (108)
- Jülicher, Frank (108)
期刊文献
Review
- Nature genetics reviews: Single-cell omics
- Single-Cell Transcriptional Analysis-Annual Review of Analytical Chemistry
- Single Cell Multi-Omics Technology: Methodology and Application-Ying Guo3-20 April 2018, Front. Cell Dev. Biol.
- 2018 reviews
- Single-cell RNA sequencing technologies and bioinformatics pipelines-Duhee Bang, Experimental & Molecular Medicinevolume
数据库
Just for readers in VIP forum
http://www.biotrainee.com/forum-114-1.html
http://www.biotrainee.com/thread-1334-1-1.html
Week2 单细胞入门-听一篇Cell报告
Week3 单细胞入门-了解Microwell-seq&scMCA
文献阅读week10 单细胞测序入坑
专门分析10x genomic公司的单细胞转录组数据的软件套件
单细胞数据的降维与聚类
本文的图片内容来自王克帧楼的清华大学的陈文昌课题组邹子恒同学汇报ppt，汇报主要包含了单细胞数据的常见降维与聚类算法原理。
因此通过本次总结，积累相关算法背后的统计学背景。
- 降维
- t-SNE
- t-SNE 和 scRNA-seq data 例子
- 针对scRNA-seq数据的更多降维方法
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